Loosely based on the Hasbro comics and toy line, Cobra resurfaces in it's quest for global domination by any means necessary. To make matters more interesting, the G.I. Joe unit gets set up by factions within their own government; thus causing our protagonists to go into hiding. However, things take a drastic turn for the worse, as they uncover the truth behind Cobra's sinister plan. Meanwhile, it seems like Snake Eyes still has an old score to settle with his long time nemesis, Storm Shadow.